Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL02T12C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_02424 | Not Available | Negative | 2909879 - 2910154 | 10172.4 |
| a/g-specific adenine glycosylase | HMPREF1064_02425 | Not Available | Positive | 2910334 - 2911392 | 40526.6 |
| single-strand binding protein | HMPREF1064_02426 | Not Available | Positive | 2911407 - 2911871 | 17252.3 |
| gliding motility-associated protein glde | HMPREF1064_02427 | Not Available | Positive | 2911908 - 2913266 | 51138.0 |
| hypothetical protein | HMPREF1064_02428 | Not Available | Positive | 2913275 - 2913901 | 24489.2 |
| hypothetical protein | HMPREF1064_02429 | Not Available | Negative | 2914373 - 2916154 | 68772.5 |
| hypothetical protein | HMPREF1064_02430 | Not Available | Negative | 2916173 - 2916862 | 26232.9 |
| l-asparaginase, type i | HMPREF1064_02431 | Not Available | Negative | 2917059 - 2918102 | 38739.7 |
| tryptophan synthase alpha chain | HMPREF1064_02432 | Not Available | Negative | 2918772 - 2919548 | 28943.1 |
| n-(5'-phosphoribosyl)anthranilate isomerase | HMPREF1064_02433 | Not Available | Negative | 2919545 - 2920162 | 22979.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

