Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL02T12C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_02414 | Not Available | Positive | 2897641 - 2899230 | 60862.9 |
| hypothetical protein | HMPREF1064_02415 | Not Available | Positive | 2899243 - 2900487 | 47251.8 |
| had hydrolase, family ia | HMPREF1064_02416 | Not Available | Negative | 2900600 - 2901334 | 27061.4 |
| glucose-6-phosphate isomerase | HMPREF1064_02417 | Not Available | Negative | 2901486 - 2902829 | 48991.8 |
| hypothetical protein | HMPREF1064_02418 | Not Available | Negative | 2902843 - 2903838 | 37103.2 |
| lysyl-trna synthetase | HMPREF1064_02419 | Not Available | Negative | 2903895 - 2905625 | 66416.2 |
| hypothetical protein | HMPREF1064_02420 | Not Available | Negative | 2905700 - 2906308 | 23053.1 |
| hypothetical protein | HMPREF1064_02421 | Not Available | Positive | 2906539 - 2907081 | 20233.0 |
| hypothetical protein | HMPREF1064_02422 | Not Available | Positive | 2907088 - 2907894 | 30801.2 |
| rne/rng family ribonuclease | HMPREF1064_02423 | Not Available | Negative | 2908066 - 2909640 | 59689.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

