Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL02T12C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_00034 | Not Available | Positive | 34294 - 37113 | 106333.0 |
| hypothetical protein | HMPREF1064_00035 | Not Available | Positive | 37128 - 38615 | 57494.8 |
| hypothetical protein | HMPREF1064_00036 | Not Available | Positive | 38628 - 39335 | 26489.8 |
| hypothetical protein | HMPREF1064_00037 | Not Available | Positive | 39332 - 39844 | 19390.4 |
| had hydrolase, family ia | HMPREF1064_00038 | Not Available | Positive | 39900 - 41969 | 79671.0 |
| 50s ribosomal protein l21 | HMPREF1064_00039 | Not Available | Positive | 42184 - 42501 | 11771.4 |
| 50s ribosomal protein l27 | HMPREF1064_00040 | Not Available | Positive | 42523 - 42786 | 9252.17 |
| thiamine pyrophosphokinase | HMPREF1064_00041 | Not Available | Negative | 42844 - 43479 | 23823.7 |
| nicotinamide mononucleotide transporter pnuc | HMPREF1064_00042 | Not Available | Negative | 43466 - 44038 | 22158.6 |
| serine-trna ligase | HMPREF1064_00043 | Not Available | Positive | 44158 - 45432 | 47900.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

