Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Porphyromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | Porphyromonas |
| Species | Porphyromonas sp. KLE 1280 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
484654 bp
Thymine Count
491416 bp
Guanine Count
616244 bp
Cytosine Count
611098 bp
Genome Length
2203412 bp
Protein-coding Genes
1763 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative alpha-1,2-mannosidase | HMPREF1121_00479 | Not Available | Positive | 587809 - 590118 | 87207.2 |
| putative dna-binding protein hu | HMPREF1121_00480 | Not Available | Positive | 590300 - 590593 | 10433.9 |
| hypothetical protein | HMPREF1121_00481 | Not Available | Positive | 590691 - 590984 | 10798.8 |
| ycei-like domain protein | HMPREF1121_00482 | Not Available | Negative | 591299 - 591970 | 24179.6 |
| glutaconyl-coa decarboxylase subunit beta | HMPREF1121_00483 | Not Available | Negative | 592178 - 593332 | 40834.2 |
| glutaconyl-coa decarboxylase subunit gamma | HMPREF1121_00484 | Not Available | Negative | 593337 - 593822 | 16190.4 |
| hypothetical protein | HMPREF1121_00485 | Not Available | Negative | 593853 - 594035 | 6860.35 |
| sodium pump decarboxylase, gamma subunit | HMPREF1121_00486 | Not Available | Negative | 594058 - 594555 | 18062.2 |
| carboxyl transferase domain protein | HMPREF1121_00487 | Not Available | Negative | 594599 - 596152 | 56041.3 |
| methylmalonyl-coa epimerase | HMPREF1121_00488 | Not Available | Negative | 596278 - 596691 | 15068.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


