Porphyromonas sp. KLE 1280

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Porphyromonadaceae

Genus

Porphyromonas

Description

Porphyromonas sp. KLE 1280 is a rod-shaped bacterium characterized by the presence of flagella, which contributes to its motility. This organism has a single replicon, indicating that it possesses a streamlined genetic structure for its genomic organization. The genomic information for Porphyromonas sp. KLE 1280 is cataloged under the accession number JNOS00000000.1. The presence of flagella suggests that Porphyromonas sp. KLE 1280 may have enhanced mobility, which could play a significant role in its ecological interactions, such as colonization of specific niches or evasion of host immune responses. The rod shape is typical for many bacteria, and it may influence the organism's surface area-to-volume ratio, thereby affecting nutrient uptake and metabolic efficiency. In an ecological context, the motility afforded by flagella may allow Porphyromonas sp. KLE 1280 to navigate complex environments, potentially facilitating interactions with other microorganisms or host tissues. As a member of the Porphyromonas genus, it may also be involved in the microbial communities associated with oral or gastrointestinal ecosystems, where it could contribute to the overall dynamics of microbial populations and their associated functions. Understanding these traits provides insights into the ecological roles that Porphyromonas sp. KLE 1280 may play within its habitat.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyPorphyromonadaceae
GenusPorphyromonas
SpeciesPorphyromonas sp. KLE 1280
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Porphyromonas sp. KLE 1280


Gene Summary

Adenine Count

484654 bp

Thymine Count

491416 bp

Guanine Count

616244 bp

Cytosine Count

611098 bp

Genome Length

2203412 bp

Protein-coding Genes

1763 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
s-adenosylmethionine:trna ribosyltransferase-isomeraseHMPREF1121_00019Not AvailableNegative22058 - 2311940323.4
trna pseudouridine synthase bHMPREF1121_00020Not AvailableNegative23137 - 2386827164.8
undecaprenyl-diphosphatase upppHMPREF1121_00021Not AvailableNegative23872 - 2470530542.5
hypothetical proteinHMPREF1121_00022Not AvailableNegative24705 - 249508969.36
efflux abc transporter, permease proteinHMPREF1121_00023Not AvailableNegative24993 - 2587131956.4
carboxynorspermidine decarboxylaseHMPREF1121_00024Not AvailablePositive26352 - 2749143260.5
ribonucleoside-diphosphate reductase, beta subunitHMPREF1121_00025Not AvailablePositive27529 - 2847937443.2
putative ribonucleoside-diphosphate reductase, alpha chainHMPREF1121_00026Not AvailablePositive28466 - 3014863083.6
signal recognition particle-docking protein ftsyHMPREF1121_00027Not AvailablePositive30182 - 3113534201.3
ribosomal protein s12 methylthiotransferase rimoHMPREF1121_00028Not AvailablePositive31132 - 3243949715.4

Displaying genes 21 – 30 of 1818 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.