Prevotella nigrescens ATCC 33563

Gram-negativeAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Prevotellaceae

Genus

Prevotella

Description

Prevotella nigrescens ATCC 33563 is a Gram-negative, anaerobic bacterium that exhibits the presence of flagella. This organism is part of the Prevotella genus, which is known for its role in the human microbiome, particularly in the oral cavity and gastrointestinal tract. The anaerobic nature of P. nigrescens suggests that it thrives in oxygen-deprived environments, which is typical for many members of the Prevotella species. P. nigrescens ATCC 33563 has a single replicon, indicating a relatively simple genomic structure compared to organisms with multiple replicons. The specific accession number for the genomic data of this strain is AFPX00000000.1, which can be used to reference its genetic information in various biological databases. The ecological significance of Prevotella nigrescens lies in its contribution to the overall microbial community within the host. As an anaerobe, it plays a crucial role in the fermentation of dietary fibers and the metabolism of complex carbohydrates, which can influence host health and disease states, including oral health and systemic conditions. The presence of flagella may also provide motility advantages, aiding this bacterium in colonizing specific niches within the anaerobic environments it inhabits. Overall, P. nigrescens ATCC 33563 represents an important component of the microbial ecosystem with potential implications for human health.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyPrevotellaceae
GenusPrevotella
SpeciesPrevotella nigrescens
StrainATCC 33563

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Prevotella nigrescens ATCC 33563 contig00086, whole genome shotgun

Gene Summary

Adenine Count

747817 bp

Thymine Count

751486 bp

Guanine Count

555600 bp

Cytosine Count

557327 bp

Genome Length

2612230 bp

Protein-coding Genes

2421 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transcriptional regulatorHMPREF9419_1022Not AvailablePositive1098799 - 109913712983.9
hypothetical proteinHMPREF9419_1023Not AvailableNegative1099262 - 110007430458.5
gtp-binding protein obgHMPREF9419_1024Not AvailableNegative1100067 - 110123943435.6
adenylate kinaseHMPREF9419_1025Not AvailableNegative1101402 - 110197421319.8
hypoxanthine phosphoribosyltransferaseHMPREF9419_1026Not AvailableNegative1101974 - 110251320031.4
sugar kinaseHMPREF9419_1027Not AvailablePositive1102606 - 110412354722.9
hypothetical proteinHMPREF9419_1028Not AvailableNegative1104567 - 11046955091.22
electron transfer flavoprotein beta subunitHMPREF9419_1029Not AvailablePositive1104704 - 110557331128.4
electron transfer flavoprotein alpha subunitHMPREF9419_1030Not AvailablePositive1105577 - 110659936892.1
acyl-coa dehydrogenaseHMPREF9419_1031Not AvailablePositive1106619 - 110833764832.3

Displaying genes 1051 – 1060 of 2471 in total

Metabolites

321 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da

Displaying 1–10 of 321 metabolites

Health Effects

No health effects information available for this bacterium.