Polaribacter reichenbachii str. KCTC 23969

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Polaribacter

Description

Polaribacter reichenbachii strain KCTC 23969 is a Gram-negative bacterium characterized by its rod-shaped morphology. This strain is notable for having a single replicon, which is a unique feature that may influence its genetic stability and adaptability. The strain is cataloged under the accession number LSFL00000000.1, indicating its availability in genomic databases for further research and analysis. As a member of the genus Polaribacter, this bacterium is positioned within the broader context of marine microbiology. Members of the Polaribacter genus are often found in polar and subpolar environments, where they play significant roles in the decomposition of organic matter and nutrient cycling. Given the ecological context of Polaribacter reichenbachii, it can be inferred that it may contribute to the dynamics of microbial communities in cold marine ecosystems. The understanding of Polaribacter reichenbachii strain KCTC 23969 could provide insights into the adaptations of microbial life in extreme environments, particularly how Gram-negative bacteria survive and thrive in cold, nutrient-limited conditions. Such knowledge is crucial for comprehending the ecological functions of these microorganisms and their potential applications in biotechnology and environmental science.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusPolaribacter
SpeciesPolaribacter reichenbachii
StrainKCTC 23969

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Polaribacter reichenbachii str. KCTC 23969
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Chlorophyta
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Polaribacter reichenbachii str. KCTC 23969


Gene Summary

Adenine Count

1456367 bp

Thymine Count

1439131 bp

Guanine Count

605934 bp

Cytosine Count

603005 bp

Genome Length

4104437 bp

Protein-coding Genes

3418 genes

Non-Coding Genes

44 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3-isopropylmalate dehydrogenaseLPB301_02360Not AvailableNegative537640 - 53876141188.3
2-isopropylmalate synthaseLPB301_02365Not AvailableNegative538775 - 53995042805.2
hypothetical proteinLPB301_02370Not AvailablePositive540082 - 54163561494.8
bifunctional aspartokinase i/homoserine dehydrogenase iLPB301_02375Not AvailablePositive541961 - 54439990196.5
homoserine kinaseLPB301_02380Not AvailablePositive544466 - 54538632528.0
threonine synthaseLPB301_02385Not AvailablePositive545473 - 54675647575.7
exo-poly-alpha-d-galacturonosidaseLPB301_02390Not AvailableNegative546864 - 54833655044.8
rhamnogalacturonan acetylesteraseLPB301_02395Not AvailablePositive548479 - 54978649550.8
beta-galactosidaseLPB301_02400Not AvailablePositive549776 - 552625109605.0
rhamnogalacturonan acetylesteraseLPB301_02405Not AvailablePositive552640 - 55414256186.8

Displaying genes 471 – 480 of 3462 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.