Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | brassicacearum NFM421 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Root nodule |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1340209 bp
Thymine Count
1343075 bp
Guanine Count
2081424 bp
Cytosine Count
2078540 bp
Genome Length
6843248 bp
Protein-coding Genes
6004 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system contractile sheath large subunit | PSEBR_RS29725 | Not Available | Positive | 6702722 - 6704218 | 55643.4 |
| type vi secretion system tube protein hcp | PSEBR_RS29730 | Q9I747 | Positive | 6704439 - 6704927 | 17510.0 |
| type vi secretion system amidase effector protein tae4 | PSEBR_RS29735 | Not Available | Positive | 6705009 - 6705464 | 17151.5 |
| hypothetical protein | PSEBR_RS29740 | Not Available | Positive | 6705461 - 6705910 | 16438.8 |
| type vi secretion system baseplate subunit tsse | PSEBR_RS29745 | Q9I745 | Positive | 6705904 - 6706416 | 18736.4 |
| type vi secretion system baseplate subunit tssf | PSEBR_RS29750 | Not Available | Positive | 6706413 - 6708272 | 69243.6 |
| type vi secretion system baseplate subunit tssg | PSEBR_RS29755 | Not Available | Positive | 6708236 - 6709288 | 39726.9 |
| type vi secretion system atpase tssh | PSEBR_RS29760 | Not Available | Positive | 6709281 - 6711971 | 98367.1 |
| type vi secretion system tip protein tssi/vgrg | PSEBR_RS29765 | Q9I741 | Positive | 6712142 - 6714079 | 72234.4 |
| dcrb-related protein | PSEBR_RS29770 | Not Available | Positive | 6714098 - 6714532 | 16119.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.







