Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | brassicacearum NFM421 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Root nodule |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1340209 bp
Thymine Count
1343075 bp
Guanine Count
2081424 bp
Cytosine Count
2078540 bp
Genome Length
6843248 bp
Protein-coding Genes
6004 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hcp family type vi secretion system effector | PSEBR_RS17635 | Not Available | Positive | 4102906 - 4103403 | 17592.9 |
| type vi secretion system baseplate subunit tsse | PSEBR_RS17640 | Not Available | Positive | 4103417 - 4103860 | 16702.9 |
| type vi secretion system baseplate subunit tssf | PSEBR_RS17645 | Q9I744 | Positive | 4103844 - 4105634 | 65889.5 |
| type vi secretion system baseplate subunit tssg | PSEBR_RS17650 | Not Available | Positive | 4105598 - 4106623 | 37125.8 |
| type vi secretion system atpase tssh | PSEBR_RS17655 | Q9I742 | Positive | 4106625 - 4109168 | 92407.0 |
| hypothetical protein | PSEBR_RS17660 | Not Available | Positive | 4109197 - 4109937 | 27700.7 |
| type vi secretion system tip protein tssi/vgrg | PSEBR_RS17665 | Q9I737 | Positive | 4110075 - 4112084 | 72388.6 |
| toxin-antitoxin system ywqk family antitoxin | PSEBR_RS17670 | Not Available | Positive | 4112098 - 4112640 | 20049.4 |
| duf4280 domain-containing protein | PSEBR_RS17675 | Not Available | Negative | 4112683 - 4113078 | 13178.7 |
| phosphotransferase family protein | PSEBR_RS17680 | Q8K370 | Positive | 4113264 - 4114331 | 40731.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.







