Helicobacter pylori Hp P-11b

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori strain Hp P-11b is a Gram-negative, microaerophilic bacterium characterized by its spirilla shape and presence of flagella. This species is typically found in host-associated environments, indicating a strong association with living organisms. Hp P-11b exhibits a cell arrangement consisting of singles and is free-living, which suggests it can exist independently in its host environment. This strain has an optimal growth temperature of 37 degrees Celsius and falls within the mesophilic temperature range, making it well-suited for survival in the warm conditions of the human stomach. Hp P-11b possesses a single replicon and is structured with two membranes, a characteristic feature of Gram-negative bacteria. The ecological role of Hp P-11b can be linked to its biotic relationships, as it is known to inhabit the gastric mucosa of hosts. This association may have implications for understanding its potential pathogenicity and interactions with the human microbiome. The specific accession number for this strain is AKQH00000000.1, which provides a reference point for further research and study. Overall, the traits of Helicobacter pylori Hp P-11b highlight its specialized adaptations to host-associated habitats, emphasizing its significance in microbial ecology and potential health impacts in humans.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainHp P-11b

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori Hp P-11b
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Helicobacter pylori Hp P-11b


Gene Summary

Adenine Count

514062 bp

Thymine Count

518714 bp

Guanine Count

330074 bp

Cytosine Count

332405 bp

Genome Length

1695255 bp

Protein-coding Genes

1678 genes

Non-Coding Genes

66 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dead/deah box helicase family proteinHPHPP11B_0007P44105Positive6442 - 878191387.9
dna methylase family proteinHPHPP11B_0008Not AvailablePositive8775 - 1067073112.9
hypothetical proteinHPHPP11B_0009Not AvailableNegative10717 - 108545542.87
dna/rna non-specific endonuclease family proteinHPHPP11B_0010Not AvailablePositive11261 - 1165315481.3
hypothetical proteinHPHPP11B_0011Not AvailableNegative11876 - 119984328.35
prephenate dehydrogenase family proteinHPHPP11B_0012P20692Negative12076 - 1290330531.4
atp-dependent protease laHPHPP11B_0013Q9ZJL3Negative12912 - 1540193693.4
hypothetical proteinHPHPP11B_0014O25930Negative15443 - 1610526245.8
hypothetical proteinHPHPP11B_0015Not AvailableNegative16096 - 162907307.13
flagellar assembly factor fliw 2HPHPP11B_0016O25929Positive16508 - 1689714820.2

Displaying genes 31 – 40 of 1744 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

94 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000642S-adenosyl-4-methylsulfanyl-2-oxobutanoateC15H19N5O6SChemical structure of S-adenosyl-4-methylsulfanyl-2-oxobutanoateNot available
Average397.406Da
Monoisotopic397.105604055Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001697(S)-4,5-dihydroxypentane-2,3-dioneC5H8O4Chemical structure of (S)-4,5-dihydroxypentane-2,3-dioneNot available
Average132.1146Da
Monoisotopic132.042258744Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001779orotateC5H3N2O4Chemical structure of orotateNot available
Average155.09Da
Monoisotopic155.0098302Da

Displaying 1–10 of 94 metabolites

Health Effects

No health effects information available for this bacterium.