Helicobacter pylori Hp H-34

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori Hp H-34 is a Gram-negative bacterium characterized by its microaerophilic oxygen requirement and spirilla shape. It typically resides in host-associated environments, indicating a close relationship with its host organisms. The bacterium is free-living, which suggests it can survive outside of a specific host but is often associated with the gastric mucosa in humans and other animals. This species is notable for its single cell arrangement and presence of flagella, which may facilitate its motility within viscous environments such as mucus. However, the data indicate that it does not exhibit mobility, possibly due to a specific adaptation to its ecological niche. The optimal growth temperature for H. pylori Hp H-34 is 37°C, and it falls within the mesophilic temperature range, suggesting that it thrives in temperatures typical of warm-blooded hosts. The bacterium possesses a single replicon and has a double membrane structure, which is characteristic of Gram-negative bacteria. These features may contribute to its survival mechanisms, including resistance to certain environmental stresses. Understanding the traits of Helicobacter pylori Hp H-34 provides insight into its ecological role and potential implications in host health. Given its association with the gastric environment, it may play a part in the complex interplay between host microbiota and gastrointestinal health.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainHp H-34

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori Hp H-34
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Helicobacter pylori Hp H-34


Gene Summary

Adenine Count

490447 bp

Thymine Count

498363 bp

Guanine Count

317397 bp

Cytosine Count

321030 bp

Genome Length

1627237 bp

Protein-coding Genes

1616 genes

Non-Coding Genes

86 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Hypothetical proteinHPHPH34_0832Not AvailableNegative776686 - 779532107729.0
Putative transposaseHPHPH34_0833Not AvailableNegative779612 - 78005817583.5
TransposaseHPHPH34_0834Not AvailablePositive780110 - 78139349572.2
Jhp1044-like mosaic region proteinHPHPH34_0835Not AvailableNegative781390 - 78323468937.7
Putative chromosome segregation proteinHPHPH34_0836Not AvailableNegative783306 - 78449046126.4
Dna primaseHPHPH34_0837Not AvailableNegative784523 - 78607960404.3
Putative dna repair proteinHPHPH34_0838Not AvailableNegative786090 - 78725345028.0
Hypothetical proteinHPHPH34_0839Not AvailableNegative787275 - 7874758191.38
Hypothetical proteinHPHPH34_0840Not AvailableNegative787755 - 78851029695.7
Hypothetical proteinHPHPH34_0841Not AvailableNegative788819 - 78913912762.5

Displaying genes 31 – 40 of 1702 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

167 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm0000243heteropyrithiamineC11H13N4Chemical structure of heteropyrithiamineNot available
Average201.252Da
Monoisotopic201.113472855Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000400(R)-10-hydroxyoctadecanoateC18H35O3Chemical structure of (R)-10-hydroxyoctadecanoateNot available
Average299.476Da
Monoisotopic299.2591686Da
BASm0000590phloretateC9H9O3Chemical structure of phloretateNot available
Average165.169Da
Monoisotopic165.05571773Da

Displaying 1–10 of 167 metabolites

Health Effects

No health effects information available for this bacterium.