Helicobacter pylori CPY1962

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori CPY1962 is a Gram-negative, microaerophilic bacterium characterized by its spirilla shape and the presence of flagella. This organism is typically found in host-associated habitats, where it exhibits a free-living biotic relationship. CPY1962 has an optimal growth temperature of 37°C and falls within the mesophilic temperature range. The cell arrangement of Helicobacter pylori CPY1962 is primarily in singles, and it possesses a single replicon, indicating its genetic structure is relatively straightforward. Notably, the bacterium has a dual-membrane structure, which is characteristic of Gram-negative bacteria. Understanding the ecological role of Helicobacter pylori CPY1962 is crucial, especially considering its association with human hosts. The presence of this bacterium in the gastrointestinal tract is linked to various health conditions, including peptic ulcers and gastric cancer. Its ability to thrive in microaerophilic conditions suggests that it plays a specialized role in the gut microbiome, potentially influencing host health and disease processes. The accession number for Helicobacter pylori CPY1962 is AKNL00000000.1, which can be used for further genomic studies. Overall, the traits of this bacterium highlight its specific adaptations to host environments and underscore its significance in human health and disease.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainCPY1962

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori CPY1962
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Helicobacter pylori CPY1962 CPY1962.contig.7_1, whole genome

Gene Summary

Adenine Count

472818 bp

Thymine Count

481789 bp

Guanine Count

302261 bp

Cytosine Count

304693 bp

Genome Length

1561561 bp

Protein-coding Genes

1607 genes

Non-Coding Genes

41 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dipeptide abc transporter, atp-binding proteinHPCPY1962_0554Not AvailablePositive521942 - 52280532257.5
nickel abc superfamily atp binding cassette transporter, abc proteinHPCPY1962_0555Not AvailablePositive522802 - 52360830513.3
obg family gtpase cgtaHPCPY1962_0556Not AvailablePositive523643 - 52471038236.2
hypothetical proteinHPCPY1962_0557Not AvailablePositive524782 - 52574736449.0
base-induced polyisoprenoid-binding periplasmic proteinHPCPY1962_0558Not AvailablePositive525996 - 52655020351.8
glutamate-1-semialdehyde-2,1-aminomutaseHPCPY1962_0559Not AvailablePositive526560 - 52785246741.2
arginine biosynthesis bifunctional protein argjHPCPY1962_0560Not AvailablePositive527857 - 5281149780.17
hypothetical proteinHPCPY1962_0561Not AvailablePositive528130 - 52853415110.0
putative n-carbamoyl-d-amino acid amidohydrolaseHPCPY1962_0562Not AvailablePositive528618 - 52950232584.5
cyclic imide hydrolaseHPCPY1962_0563Not AvailablePositive529515 - 53039633616.2

Displaying genes 561 – 570 of 1648 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.