Helicobacter pylori CPY1962

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori CPY1962 is a Gram-negative, microaerophilic bacterium characterized by its spirilla shape and the presence of flagella. This organism is typically found in host-associated habitats, where it exhibits a free-living biotic relationship. CPY1962 has an optimal growth temperature of 37°C and falls within the mesophilic temperature range. The cell arrangement of Helicobacter pylori CPY1962 is primarily in singles, and it possesses a single replicon, indicating its genetic structure is relatively straightforward. Notably, the bacterium has a dual-membrane structure, which is characteristic of Gram-negative bacteria. Understanding the ecological role of Helicobacter pylori CPY1962 is crucial, especially considering its association with human hosts. The presence of this bacterium in the gastrointestinal tract is linked to various health conditions, including peptic ulcers and gastric cancer. Its ability to thrive in microaerophilic conditions suggests that it plays a specialized role in the gut microbiome, potentially influencing host health and disease processes. The accession number for Helicobacter pylori CPY1962 is AKNL00000000.1, which can be used for further genomic studies. Overall, the traits of this bacterium highlight its specific adaptations to host environments and underscore its significance in human health and disease.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainCPY1962

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori CPY1962
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Helicobacter pylori CPY1962 CPY1962.contig.7_1, whole genome

Gene Summary

Adenine Count

472818 bp

Thymine Count

481789 bp

Guanine Count

302261 bp

Cytosine Count

304693 bp

Genome Length

1561561 bp

Protein-coding Genes

1607 genes

Non-Coding Genes

41 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphatidylglycerophosphatase aHPCPY1962_1145Not AvailablePositive1102259 - 110273516826.1
d-alanine--d-alanine ligaseHPCPY1962_1146Not AvailablePositive1102812 - 110385539683.0
2-hydroxy-6-oxohepta-2,4-dienoate hydrolaseHPCPY1962_1147Not AvailablePositive1103855 - 110458027584.5
udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligaseHPCPY1962_1148Not AvailablePositive1104567 - 110604856089.9
hit family proteinHPCPY1962_1149Not AvailablePositive1106058 - 110654318271.2
ribose-phosphate pyrophosphokinaseHPCPY1962_1150Not AvailablePositive1106635 - 110756433750.2
Trna-metNot AvailableNot AvailablePositive1107575 - 1107651Not Available
hypothetical proteinHPCPY1962_1153Not AvailableNegative1108775 - 110983638482.0
hypothetical proteinHPCPY1962_1154Not AvailableNegative1109814 - 11099635405.78
pseudouridine synthaseHPCPY1962_1155Not AvailablePositive1110128 - 111111137869.7

Displaying genes 1151 – 1160 of 1648 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.