Methanothrix soehngenii GP6 str. GP-6

Non-motileAnaerobic

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Methanomicrobia

Order

Methanotrichales

Family

Methanotrichaceae

Genus

Methanothrix

Description

Methanothrix soehngenii GP6 str. GP-6 is a mesophilic, anaerobic bacterium found in fresh water habitats. This organism is classified as a lithotroph, meaning it derives its energy from inorganic sources. It does not exhibit mobility and is nonsporulating, indicating that it does not form spores for survival under adverse conditions. Methanothrix soehngenii GP6 str. GP-6 has a single replicon, which suggests a streamlined genetic structure. This bacterium is notable for its ecological role in anaerobic environments, particularly in the biogeochemical cycling of methane, a significant greenhouse gas. As a free-living organism, it likely contributes to the degradation of organic matter in aquatic ecosystems, thus influencing the overall dynamics of nutrient cycling. The presence of flagella, despite its lack of mobility, may play a role in its attachment to surfaces or in other non-motile processes. The genetic information for Methanothrix soehngenii GP6 str. GP-6 is cataloged under the accession number NC_015416.1, which can be useful for further research into its metabolic pathways and interactions within its ecosystem. Understanding the characteristics and ecological functions of this bacterium can provide insights into anaerobic microbial communities and their impact on freshwater environments.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassMethanomicrobia
OrderMethanotrichales
FamilyMethanotrichaceae
GenusMethanothrix
SpeciesMethanothrix soehngenii
StrainGP6 GP-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatFresh water
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceLithotroph
PathogenicityNot Available

Genome Summary

Methanothrix soehngenii GP6, complete sequence.

Gene Summary

Adenine Count

736128 bp

Thymine Count

737185 bp

Guanine Count

769254 bp

Cytosine Count

766059 bp

Genome Length

3008626 bp

Protein-coding Genes

3000 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pua domain-containing proteinMCON_RS00935Not AvailableNegative202696 - 20314816650.1
serine hydroxymethyltransferaseMCON_RS00940Not AvailablePositive203287 - 20453145233.8
bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolaseMCON_RS00945Not AvailablePositive204528 - 20539130860.8
duf2121 domain-containing proteinMCON_RS00950Not AvailablePositive205448 - 20604422197.8
molybdenum cofactor guanylyltransferaseMCON_RS00955Not AvailablePositive206029 - 20669724805.1
hypothetical proteinMCON_RS15900Not AvailableNegative206703 - 2068857213.34
tyrosine--trna ligaseMCON_RS00960Not AvailablePositive206990 - 20794935834.8
3-phosphoshikimate 1-carboxyvinyltransferaseMCON_RS00965Not AvailableNegative208042 - 20931344760.7
type ii toxin-antitoxin system vapc family toxinMCON_RS00970Not AvailableNegative209516 - 20989914300.4
antitoxin vapb family proteinMCON_RS00975Not AvailableNegative209896 - 2101148432.12

Displaying genes 191 – 200 of 2326 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

2 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0014032Acetic acidC2H4O2Chemical structure of Acetic acid64-19-7
Average60.052Da
Monoisotopic60.021129372Da

Displaying 1–2 of 2 metabolites

Health Effects

No health effects information available for this bacterium.