Methanothrix soehngenii GP6 str. GP-6

Non-motileAnaerobic

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Methanomicrobia

Order

Methanotrichales

Family

Methanotrichaceae

Genus

Methanothrix

Description

Methanothrix soehngenii GP6 str. GP-6 is a mesophilic, anaerobic bacterium found in fresh water habitats. This organism is classified as a lithotroph, meaning it derives its energy from inorganic sources. It does not exhibit mobility and is nonsporulating, indicating that it does not form spores for survival under adverse conditions. Methanothrix soehngenii GP6 str. GP-6 has a single replicon, which suggests a streamlined genetic structure. This bacterium is notable for its ecological role in anaerobic environments, particularly in the biogeochemical cycling of methane, a significant greenhouse gas. As a free-living organism, it likely contributes to the degradation of organic matter in aquatic ecosystems, thus influencing the overall dynamics of nutrient cycling. The presence of flagella, despite its lack of mobility, may play a role in its attachment to surfaces or in other non-motile processes. The genetic information for Methanothrix soehngenii GP6 str. GP-6 is cataloged under the accession number NC_015416.1, which can be useful for further research into its metabolic pathways and interactions within its ecosystem. Understanding the characteristics and ecological functions of this bacterium can provide insights into anaerobic microbial communities and their impact on freshwater environments.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassMethanomicrobia
OrderMethanotrichales
FamilyMethanotrichaceae
GenusMethanothrix
SpeciesMethanothrix soehngenii
StrainGP6 GP-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatFresh water
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceLithotroph
PathogenicityNot Available

Genome Summary

Methanothrix soehngenii GP6, complete sequence.

Gene Summary

Adenine Count

736128 bp

Thymine Count

737185 bp

Guanine Count

769254 bp

Cytosine Count

766059 bp

Genome Length

3008626 bp

Protein-coding Genes

3000 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
porphobilinogen synthaseMCON_RS06420Not AvailableNegative1290849 - 129180535029.2
glutamyl-trna reductaseMCON_RS06425Not AvailableNegative1291802 - 129304946211.1
bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelataseMCON_RS06430Not AvailableNegative1292991 - 129369226610.1
lrp/asnc family transcriptional regulatorMCON_RS06435Not AvailableNegative1293717 - 129417517243.6
nitrous oxide reductase family maturation protein nosdMCON_RS06440Not AvailableNegative1294175 - 129631375538.6
pas domain s-box proteinMCON_RS06445Not AvailablePositive1296431 - 129768446971.9
chorismate synthaseMCON_RS06450Not AvailablePositive1297674 - 129876238676.8
molybdopterin biosynthesis proteinMCON_RS06455Not AvailablePositive1298795 - 130056462133.3
dna primase large subunit prilMCON_RS06460Not AvailableNegative1300533 - 130155838163.0
proliferating cell nuclear antigen (pcna)MCON_RS06465Not AvailableNegative1301555 - 130228926671.1

Displaying genes 1311 – 1320 of 2326 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

2 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0014032Acetic acidC2H4O2Chemical structure of Acetic acid64-19-7
Average60.052Da
Monoisotopic60.021129372Da

Displaying 1–2 of 2 metabolites

Health Effects

No health effects information available for this bacterium.