Methanothrix soehngenii GP6 str. GP-6

Non-motileAnaerobic

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Methanomicrobia

Order

Methanotrichales

Family

Methanotrichaceae

Genus

Methanothrix

Description

Methanothrix soehngenii GP6 str. GP-6 is a mesophilic, anaerobic bacterium found in fresh water habitats. This organism is classified as a lithotroph, meaning it derives its energy from inorganic sources. It does not exhibit mobility and is nonsporulating, indicating that it does not form spores for survival under adverse conditions. Methanothrix soehngenii GP6 str. GP-6 has a single replicon, which suggests a streamlined genetic structure. This bacterium is notable for its ecological role in anaerobic environments, particularly in the biogeochemical cycling of methane, a significant greenhouse gas. As a free-living organism, it likely contributes to the degradation of organic matter in aquatic ecosystems, thus influencing the overall dynamics of nutrient cycling. The presence of flagella, despite its lack of mobility, may play a role in its attachment to surfaces or in other non-motile processes. The genetic information for Methanothrix soehngenii GP6 str. GP-6 is cataloged under the accession number NC_015416.1, which can be useful for further research into its metabolic pathways and interactions within its ecosystem. Understanding the characteristics and ecological functions of this bacterium can provide insights into anaerobic microbial communities and their impact on freshwater environments.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassMethanomicrobia
OrderMethanotrichales
FamilyMethanotrichaceae
GenusMethanothrix
SpeciesMethanothrix soehngenii
StrainGP6 GP-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatFresh water
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceLithotroph
PathogenicityNot Available

Genome Summary

Methanothrix soehngenii GP6, complete sequence.

Gene Summary

Adenine Count

736128 bp

Thymine Count

737185 bp

Guanine Count

769254 bp

Cytosine Count

766059 bp

Genome Length

3008626 bp

Protein-coding Genes

3000 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
is21-like element helper atpase istbMCON_RS05610Not AvailablePositive1114591 - 111499215749.9
dgtp triphosphohydrolaseMCON_RS05615Not AvailableNegative1115136 - 111680665798.9
hypothetical proteinMCON_RS16655Not AvailablePositive1117012 - 11172609449.62
duf460 domain-containing proteinMCON_RS05625Not AvailableNegative1117596 - 111959974397.6
rio1 family regulatory kinase/atpaseMCON_RS05630Not AvailableNegative1119596 - 112046532958.9
isocitrate/isopropylmalate family dehydrogenaseMCON_RS05635Not AvailableNegative1120490 - 112170745462.6
sugar phosphate nucleotidyltransferaseMCON_RS05640Not AvailablePositive1121985 - 112325046643.1
hypothetical proteinMCON_RS05645Not AvailableNegative1123255 - 11234919853.6
uracil-dna glycosylaseMCON_RS05650Not AvailablePositive1123603 - 112418121082.0
3-isopropylmalate dehydratase large subunitMCON_RS05655Not AvailablePositive1124227 - 112551646381.9

Displaying genes 1141 – 1150 of 2326 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

2 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0014032Acetic acidC2H4O2Chemical structure of Acetic acid64-19-7
Average60.052Da
Monoisotopic60.021129372Da

Displaying 1–2 of 2 metabolites

Health Effects

No health effects information available for this bacterium.