Paenibacillus terrae HPL-003

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Paenibacillaceae

Genus

Paenibacillus

Description

Paenibacillus terrae HPL-003 is a notable bacterium characterized by its single replicon, which is indicated by its accession number NC_016641.1. This organism belongs to the genus Paenibacillus, which is known for its diverse metabolic capabilities and ecological relevance. Paenibacillus species are typically found in soil and contribute significantly to nutrient cycling and soil health. They are often involved in the degradation of organic matter and can promote plant growth through various mechanisms, such as producing plant hormones and enhancing nutrient availability. The unique genomic features captured in the accession NC_016641.1 provide insight into the genetic makeup of P. terrae HPL-003, which may include genes that contribute to its adaptability and ecological functions. Understanding the genomic characteristics of this bacterium can shed light on its role within its native habitat, particularly in soil ecosystems where it may interact with plants and other microorganisms. In summary, the single replicon and its associated genomic data position Paenibacillus terrae HPL-003 as a significant player in soil ecology, with potential implications for agricultural practices and sustainable land management. This highlights the importance of studying such microorganisms to harness their capabilities for improving soil health and productivity.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyPaenibacillaceae
GenusPaenibacillus
SpeciesPaenibacillus terrae
StrainHPL-003

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paenibacillus terrae HPL-003, complete sequence.

Gene Summary

Adenine Count

1618736 bp

Thymine Count

1619452 bp

Guanine Count

1420924 bp

Cytosine Count

1424283 bp

Genome Length

6083395 bp

Protein-coding Genes

5322 genes

Non-Coding Genes

193 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tyrosine-type recombinase/integraseHPL003_RS22205Not AvailableNegative5026645 - 502698412158.3
ymaf family proteinHPL003_RS27970Not AvailableNegative5027155 - 502755614516.8
duf2294 domain-containing proteinHPL003_RS22215Not AvailablePositive5027914 - 502840518731.5
formate dehydrogenase subunit alphaHPL003_RS22220Not AvailablePositive5028534 - 503069679691.2
4fe-4s dicluster domain-containing proteinHPL003_RS22225Not AvailablePositive5030693 - 503132221939.4
[fefe] hydrogenase, group aHPL003_RS22230Not AvailablePositive5031356 - 503286155169.0
4fe-4s dicluster domain-containing proteinHPL003_RS22235Not AvailablePositive5033048 - 503363821082.6
aspartate ammonia-lyaseHPL003_RS22240Not AvailablePositive5033640 - 503508852126.1
[fefe] hydrogenase h-cluster maturation gtpase hydfHPL003_RS22245Not AvailablePositive5035075 - 503632845375.5
[fefe] hydrogenase h-cluster radical sam maturase hydgHPL003_RS22250Not AvailableNegative5036440 - 503785253602.6

Displaying genes 4541 – 4550 of 5515 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.