Paenibacillus terrae HPL-003

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Paenibacillaceae

Genus

Paenibacillus

Description

Paenibacillus terrae HPL-003 is a notable bacterium characterized by its single replicon, which is indicated by its accession number NC_016641.1. This organism belongs to the genus Paenibacillus, which is known for its diverse metabolic capabilities and ecological relevance. Paenibacillus species are typically found in soil and contribute significantly to nutrient cycling and soil health. They are often involved in the degradation of organic matter and can promote plant growth through various mechanisms, such as producing plant hormones and enhancing nutrient availability. The unique genomic features captured in the accession NC_016641.1 provide insight into the genetic makeup of P. terrae HPL-003, which may include genes that contribute to its adaptability and ecological functions. Understanding the genomic characteristics of this bacterium can shed light on its role within its native habitat, particularly in soil ecosystems where it may interact with plants and other microorganisms. In summary, the single replicon and its associated genomic data position Paenibacillus terrae HPL-003 as a significant player in soil ecology, with potential implications for agricultural practices and sustainable land management. This highlights the importance of studying such microorganisms to harness their capabilities for improving soil health and productivity.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyPaenibacillaceae
GenusPaenibacillus
SpeciesPaenibacillus terrae
StrainHPL-003

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paenibacillus terrae HPL-003, complete sequence.

Gene Summary

Adenine Count

1618736 bp

Thymine Count

1619452 bp

Guanine Count

1420924 bp

Cytosine Count

1424283 bp

Genome Length

6083395 bp

Protein-coding Genes

5322 genes

Non-Coding Genes

193 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
plp-dependent aminotransferase family proteinHPL003_RS11065Not AvailableNegative2416444 - 241794956112.4
pyridoxamine 5'-phosphate oxidase family proteinHPL003_RS11070Not AvailablePositive2418064 - 241867523102.4
tetr/acrr family transcriptional regulatorHPL003_RS11075Not AvailablePositive2418879 - 241947822367.0
hypothetical proteinHPL003_RS29700Not AvailablePositive2419576 - 24196773392.36
tyrosine-type recombinase/integraseHPL003_RS11080Not AvailablePositive2420024 - 242047816809.2
mfs transporterHPL003_RS11085Not AvailablePositive2420520 - 242173142601.1
universal stress proteinHPL003_RS11090Not AvailablePositive2421758 - 242218615402.6
aldehyde dehydrogenase family proteinHPL003_RS11095Not AvailablePositive2422229 - 242364750336.4
d-isomer specific 2-hydroxyacid dehydrogenase family proteinHPL003_RS11100Not AvailablePositive2424367 - 242535336456.6
laci family dna-binding transcriptional regulatorHPL003_RS11105Not AvailableNegative2425467 - 242649237977.8

Displaying genes 2341 – 2350 of 5515 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.