Paenibacillus terrae HPL-003

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Paenibacillaceae

Genus

Paenibacillus

Description

Paenibacillus terrae HPL-003 is a notable bacterium characterized by its single replicon, which is indicated by its accession number NC_016641.1. This organism belongs to the genus Paenibacillus, which is known for its diverse metabolic capabilities and ecological relevance. Paenibacillus species are typically found in soil and contribute significantly to nutrient cycling and soil health. They are often involved in the degradation of organic matter and can promote plant growth through various mechanisms, such as producing plant hormones and enhancing nutrient availability. The unique genomic features captured in the accession NC_016641.1 provide insight into the genetic makeup of P. terrae HPL-003, which may include genes that contribute to its adaptability and ecological functions. Understanding the genomic characteristics of this bacterium can shed light on its role within its native habitat, particularly in soil ecosystems where it may interact with plants and other microorganisms. In summary, the single replicon and its associated genomic data position Paenibacillus terrae HPL-003 as a significant player in soil ecology, with potential implications for agricultural practices and sustainable land management. This highlights the importance of studying such microorganisms to harness their capabilities for improving soil health and productivity.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyPaenibacillaceae
GenusPaenibacillus
SpeciesPaenibacillus terrae
StrainHPL-003

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paenibacillus terrae HPL-003, complete sequence.

Gene Summary

Adenine Count

1618736 bp

Thymine Count

1619452 bp

Guanine Count

1420924 bp

Cytosine Count

1424283 bp

Genome Length

6083395 bp

Protein-coding Genes

5322 genes

Non-Coding Genes

193 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter substrate-binding proteinHPL003_RS09745Not AvailableNegative2123860 - 212490638234.5
pyridoxamine 5'-phosphate oxidase family proteinHPL003_RS09750Not AvailablePositive2125479 - 212591316311.3
bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidaseHPL003_RS09755Not AvailablePositive2126138 - 212824376607.5
pbecr4 domain-containing proteinHPL003_RS09760Not AvailableNegative2128590 - 212913221033.8
eal domain-containing proteinHPL003_RS09765Not AvailablePositive2129631 - 213069240211.2
zinc-dependent alcohol dehydrogenase family proteinHPL003_RS09770Not AvailablePositive2131092 - 213210235927.7
smp-30/gluconolactonase/lre family proteinHPL003_RS09775Not AvailablePositive2132134 - 213329141825.9
sdr family oxidoreductaseHPL003_RS09780Not AvailablePositive2133310 - 213409828525.3
hypothetical proteinHPL003_RS09785Not AvailableNegative2134274 - 213536539767.6
glycoside hydrolase family 13 proteinHPL003_RS09790Not AvailablePositive2135637 - 213733766847.0

Displaying genes 2071 – 2080 of 5515 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.