Paenibacillus terrae HPL-003

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Paenibacillaceae

Genus

Paenibacillus

Description

Paenibacillus terrae HPL-003 is a notable bacterium characterized by its single replicon, which is indicated by its accession number NC_016641.1. This organism belongs to the genus Paenibacillus, which is known for its diverse metabolic capabilities and ecological relevance. Paenibacillus species are typically found in soil and contribute significantly to nutrient cycling and soil health. They are often involved in the degradation of organic matter and can promote plant growth through various mechanisms, such as producing plant hormones and enhancing nutrient availability. The unique genomic features captured in the accession NC_016641.1 provide insight into the genetic makeup of P. terrae HPL-003, which may include genes that contribute to its adaptability and ecological functions. Understanding the genomic characteristics of this bacterium can shed light on its role within its native habitat, particularly in soil ecosystems where it may interact with plants and other microorganisms. In summary, the single replicon and its associated genomic data position Paenibacillus terrae HPL-003 as a significant player in soil ecology, with potential implications for agricultural practices and sustainable land management. This highlights the importance of studying such microorganisms to harness their capabilities for improving soil health and productivity.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyPaenibacillaceae
GenusPaenibacillus
SpeciesPaenibacillus terrae
StrainHPL-003

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paenibacillus terrae HPL-003, complete sequence.

Gene Summary

Adenine Count

1618736 bp

Thymine Count

1619452 bp

Guanine Count

1420924 bp

Cytosine Count

1424283 bp

Genome Length

6083395 bp

Protein-coding Genes

5322 genes

Non-Coding Genes

193 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
l-arabinose isomeraseHPL003_RS06810Not AvailableNegative1489173 - 149059753198.3
l-ribulose-5-phosphate 4-epimeraseHPL003_RS06815Not AvailableNegative1490632 - 149132725906.8
xylulokinaseHPL003_RS06820Not AvailableNegative1491329 - 149294259035.2
tyrosine-type recombinase/integraseHPL003_RS06825Not AvailablePositive1493232 - 149431140630.6
hypothetical proteinHPL003_RS06835Not AvailableNegative1494659 - 149512017437.8
winged helix-turn-helix transcriptional regulatorHPL003_RS06840Not AvailableNegative1495286 - 149564813995.0
alpha/beta fold hydrolaseHPL003_RS06845Not AvailablePositive1495794 - 149667833886.7
dihydrofolate reductase family proteinHPL003_RS06850Not AvailablePositive1496681 - 149719018275.8
duf1835 domain-containing proteinHPL003_RS06855Not AvailableNegative1497550 - 149855738170.6
rna polymerase sigma factorHPL003_RS30310Not AvailableNegative1498583 - 14988259315.17

Displaying genes 1481 – 1490 of 5515 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.