Ruegeria halocynthiae

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Ruegeria

Description

Ruegeria halocynthiae is a Gram-negative, non-motile bacterial species characterized by its rod-shaped morphology. This organism thrives in mesophilic conditions with an optimal growth temperature of 29°C, indicating its preference for moderate temperature environments. R. halocynthiae has a singular replicon, which is a notable trait for its genetic organization. The genome of this bacterium can be accessed through the accession number FNNP00000000.1, providing a resource for further genomic and functional studies. From a biological and ecological perspective, the adaptations of Ruegeria halocynthiae to its mesophilic environment may suggest its role in marine ecosystems, particularly in interactions with marine organisms. Its Gram-negative nature may also play a role in its ecological interactions, such as nutrient cycling or symbiotic relationships, although specific interactions are not detailed in the provided traits. Understanding the growth conditions and genetic framework of R. halocynthiae could provide insights into its ecological niches and potential applications in biotechnology or environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusRuegeria
SpeciesRuegeria halocynthiae
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative / gram-positive
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Crambe crambe
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruegeria halocynthiae strain DSM 27839 genome assembly, contig:

Gene Summary

Adenine Count

921858 bp

Thymine Count

924279 bp

Guanine Count

1199491 bp

Cytosine Count

1198040 bp

Genome Length

4243668 bp

Protein-coding Genes

4188 genes

Non-Coding Genes

65 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ornithine-acyl[acyl carrier protein] n-acyltransferaseSAMN05444358_101499Not AvailablePositive478917 - 47968128667.0
atp-binding cassette, subfamily f, uupSAMN05444358_101500Not AvailablePositive479810 - 48155864180.8
maltose o-acetyltransferaseSAMN05444358_101501Not AvailableNegative481643 - 48216718319.1
nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase familySAMN05444358_101502Not AvailableNegative482196 - 48295125887.2
transcriptional regulator, arac family with amidase-like domainSAMN05444358_101503Not AvailableNegative483026 - 48397635182.4
dna-binding transcriptional regulator, gntr familySAMN05444358_101504Not AvailablePositive484111 - 48482126160.0
4-hydroxy-tetrahydrodipicolinate synthaseSAMN05444358_101505Not AvailablePositive484829 - 48574633304.2
gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenaseSAMN05444358_101506Not AvailablePositive485750 - 48727354308.3
glycine/d-amino acid oxidaseSAMN05444358_101507Not AvailablePositive487270 - 48861048056.1
meso-butanediol dehydrogenase / (s,s)-butanediol dehydrogenase / diacetyl reductaseSAMN05444358_101508Not AvailableNegative488623 - 48935725768.5

Displaying genes 501 – 510 of 4253 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.