Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyruvate dehydrogenase e1 component alpha subunit | SAMN05444358_101419 | Not Available | Negative | 398178 - 399167 | 36201.1 |
| cell division protein ftsb | SAMN05444358_101420 | Not Available | Negative | 399352 - 399651 | 11377.7 |
| phosphoglycerate kinase | SAMN05444358_101421 | Not Available | Negative | 399792 - 400982 | 41284.7 |
| peptidylprolyl isomerase | SAMN05444358_101422 | Not Available | Positive | 401118 - 401624 | 18222.4 |
| peptidylprolyl isomerase | SAMN05444358_101423 | Not Available | Positive | 401617 - 402165 | 19243.7 |
| aquaporin z | SAMN05444358_101424 | Not Available | Negative | 402217 - 402906 | 23198.6 |
| hypothetical protein | SAMN05444358_101425 | Not Available | Negative | 403072 - 403533 | 16414.8 |
| protein ccma, bactofilin family | SAMN05444358_101426 | Not Available | Negative | 403691 - 404191 | 17152.3 |
| murein dd-endopeptidase mepm and murein hydrolase activator nlpd, contain lysm domain | SAMN05444358_101427 | Not Available | Negative | 404181 - 405506 | 49163.6 |
| uncharacterized conserved protein, contains ferritin-like duf455 domain | SAMN05444358_101428 | Not Available | Negative | 405685 - 406524 | 31034.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
