Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription antitermination protein nusg | SAMN05444358_106177 | Not Available | Positive | 3125882 - 3126415 | 20066.9 |
| hypothetical protein | SAMN05444358_106178 | Not Available | Negative | 3126532 - 3127257 | 26871.5 |
| putative peptidoglycan binding domain-containing protein | SAMN05444358_106179 | Not Available | Negative | 3127672 - 3128895 | 43190.0 |
| lsu ribosomal protein l11p | SAMN05444358_106180 | Not Available | Positive | 3129278 - 3129727 | 15968.5 |
| lsu ribosomal protein l1p | SAMN05444358_106181 | Not Available | Positive | 3129729 - 3130427 | 24017.3 |
| ubiquinol-cytochrome c reductase iron-sulfur subunit | SAMN05444358_106182 | Not Available | Positive | 3130642 - 3131217 | 21503.7 |
| lsu ribosomal protein l10p | SAMN05444358_106183 | Not Available | Positive | 3131624 - 3132142 | 17873.4 |
| lsu ribosomal protein l12p | SAMN05444358_106184 | Not Available | Positive | 3132222 - 3132596 | 12635.2 |
| dna-directed rna polymerase subunit beta | SAMN05444358_106185 | Not Available | Positive | 3132846 - 3136979 | 152861.0 |
| dna-directed rna polymerase subunit beta' | SAMN05444358_106186 | Not Available | Positive | 3137029 - 3141270 | 156628.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
