Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| microcin c transport system substrate-binding protein | SAMN05444358_106157 | Not Available | Positive | 3104990 - 3106900 | 70597.4 |
| microcin c transport system permease protein | SAMN05444358_106158 | Not Available | Positive | 3106902 - 3107996 | 39513.8 |
| microcin c transport system permease protein | SAMN05444358_106159 | Not Available | Positive | 3107997 - 3109103 | 41205.3 |
| microcin c transport system atp-binding protein | SAMN05444358_106160 | Not Available | Positive | 3109100 - 3110677 | 57641.6 |
| elongation factor g | SAMN05444358_106161 | Not Available | Negative | 3110700 - 3112625 | 69099.6 |
| oxygen-independent coproporphyrinogen-3 oxidase | SAMN05444358_106162 | Not Available | Negative | 3112840 - 3114195 | 50014.6 |
| crp/fnr family transcriptional regulator, anaerobic regulatory protein | SAMN05444358_106163 | Not Available | Positive | 3114257 - 3115000 | 27613.5 |
| uncharacterized membrane protein yeaq/ymge, transglycosylase-associated protein family | SAMN05444358_106164 | Not Available | Positive | 3115046 - 3115300 | 8480.92 |
| universal stress protein family protein | SAMN05444358_106165 | Not Available | Negative | 3115348 - 3116187 | 30422.5 |
| cytochrome c oxidase cbb3-type subunit 1 | SAMN05444358_106166 | Not Available | Positive | 3116382 - 3117989 | 60230.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
