Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii, delta subunit | SAMN05444358_10675 | Not Available | Negative | 3023476 - 3024504 | 36391.8 |
| lps-assembly lipoprotein | SAMN05444358_10676 | Not Available | Negative | 3024501 - 3024992 | 17145.2 |
| leucyl-trna synthetase | SAMN05444358_10677 | Not Available | Negative | 3024979 - 3027531 | 94446.9 |
| protein of unknown function | SAMN05444358_10678 | Not Available | Negative | 3027604 - 3028089 | 17336.4 |
| outer membrane protein ompu | SAMN05444358_10679 | Not Available | Positive | 3028375 - 3029412 | 35803.6 |
| hypothetical protein | SAMN05444358_10680 | Not Available | Positive | 3029515 - 3030174 | 23754.5 |
| l,d-transpeptidase catalytic domain | SAMN05444358_10681 | Not Available | Negative | 3030158 - 3030658 | 18665.4 |
| gtp cyclohydrolase ii | SAMN05444358_10682 | Not Available | Negative | 3030655 - 3031749 | 39112.2 |
| two component transcriptional regulator, winged helix family | SAMN05444358_10683 | Not Available | Positive | 3031911 - 3032597 | 25832.1 |
| acyl-coa synthetase (amp-forming)/amp-acid ligase ii | SAMN05444358_10684 | Not Available | Negative | 3032933 - 3034444 | 54800.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
