Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipid-a-disaccharide kinase | SAMN05444358_10665 | Not Available | Negative | 3013732 - 3014730 | 35628.1 |
| 3-deoxy-d-manno-octulosonic-acid transferase | SAMN05444358_10666 | Not Available | Negative | 3014717 - 3015952 | 45052.9 |
| myo-inositol-1(or 4)-monophosphatase | SAMN05444358_10667 | Not Available | Negative | 3015949 - 3016749 | 28800.1 |
| microcin-processing peptidase 1. unknown type peptidase. merops family u62 | SAMN05444358_10668 | Not Available | Negative | 3016736 - 3018082 | 47151.4 |
| hypothetical protein | SAMN05444358_10669 | Not Available | Negative | 3018208 - 3019731 | 53633.7 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN05444358_10670 | Not Available | Positive | 3019864 - 3020613 | 26128.2 |
| enoyl-coa hydratase/carnithine racemase | SAMN05444358_10671 | Not Available | Positive | 3020610 - 3021218 | 20967.6 |
| catechol-2,3-dioxygenase | SAMN05444358_10672 | Not Available | Positive | 3021215 - 3021952 | 27412.3 |
| hypothetical protein | SAMN05444358_10673 | Not Available | Negative | 3021953 - 3022249 | 10982.5 |
| hypothetical protein | SAMN05444358_10674 | Not Available | Positive | 3022294 - 3023472 | 41951.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
