Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulatory protein, c terminal | SAMN05444358_10655 | Not Available | Negative | 3005014 - 3005715 | 25661.8 |
| hypothetical protein | SAMN05444358_10656 | Not Available | Negative | 3005687 - 3005974 | 10452.5 |
| hypothetical protein | SAMN05444358_10657 | Not Available | Positive | 3006150 - 3006629 | 18300.4 |
| rnase hii | SAMN05444358_10658 | Not Available | Positive | 3006740 - 3007357 | 22324.8 |
| modification methylase | SAMN05444358_10659 | Not Available | Positive | 3007463 - 3008566 | 41409.4 |
| adenylate/guanylate cyclase | SAMN05444358_10660 | Not Available | Positive | 3008707 - 3010089 | 51996.3 |
| alkane 1-monooxygenase | SAMN05444358_10661 | Not Available | Negative | 3010174 - 3011310 | 44081.2 |
| a/g-specific dna-adenine glycosylase | SAMN05444358_10662 | Not Available | Negative | 3011370 - 3012425 | 39031.9 |
| hypothetical protein | SAMN05444358_10663 | Not Available | Positive | 3012507 - 3013013 | 18565.2 |
| thioredoxin | SAMN05444358_10664 | Not Available | Positive | 3013028 - 3013693 | 24303.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
