Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter substrate-binding protein, paat family | SAMN05444358_10635 | Not Available | Negative | 2986523 - 2987581 | 38832.6 |
| succinyldiaminopimelate desuccinylase | SAMN05444358_10636 | Not Available | Positive | 2987789 - 2988928 | 40471.0 |
| hypothetical protein | SAMN05444358_10637 | Not Available | Positive | 2988932 - 2989507 | 21087.8 |
| rnase r | SAMN05444358_10638 | Not Available | Positive | 2989566 - 2991824 | 83120.4 |
| protein of unknown function (du1801) | SAMN05444358_10639 | Not Available | Negative | 2991815 - 2992201 | 14228.0 |
| glutathione s-transferase | SAMN05444358_10640 | Not Available | Negative | 2992198 - 2992896 | 26448.0 |
| predicted dna-binding transcriptional regulator yafy, contains an hth and wyl domains | SAMN05444358_10641 | Not Available | Positive | 2992940 - 2993686 | 27890.6 |
| lytic murein transglycosylase | SAMN05444358_10642 | Not Available | Positive | 2993756 - 2995072 | 48040.1 |
| hypothetical protein | SAMN05444358_10643 | Not Available | Positive | 2995384 - 2995506 | 4516.58 |
| transcriptional regulator, gntr family | SAMN05444358_10644 | Not Available | Negative | 2995496 - 2996179 | 25187.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
