Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444358_10625 | Not Available | Positive | 2978520 - 2978909 | 13338.4 |
| cystathionine gamma-lyase | SAMN05444358_10626 | Not Available | Negative | 2978904 - 2980004 | 39214.8 |
| hypothetical protein | SAMN05444358_10627 | Not Available | Negative | 2980008 - 2980850 | 31625.6 |
| threonine dehydratase | SAMN05444358_10628 | Not Available | Positive | 2980929 - 2981840 | 30897.1 |
| transcriptional regulator, gntr family | SAMN05444358_10629 | Not Available | Positive | 2981885 - 2982484 | 22416.2 |
| biotin transport system substrate-specific component | SAMN05444358_10630 | Not Available | Positive | 2982605 - 2983192 | 19949.5 |
| biotin synthase | SAMN05444358_10631 | Not Available | Positive | 2983185 - 2984150 | 35192.1 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | SAMN05444358_10632 | Not Available | Positive | 2984243 - 2985070 | 29453.1 |
| 2-methylisocitrate lyase, pep mutase family | SAMN05444358_10633 | Not Available | Negative | 2985171 - 2986013 | 29622.0 |
| hypothetical protein | SAMN05444358_10634 | Not Available | Positive | 2986182 - 2986526 | 12335.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
