Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ycii-related domain-containing protein | SAMN05444358_10615 | Not Available | Positive | 2970405 - 2970725 | 10855.7 |
| asparaginase | SAMN05444358_10616 | Not Available | Negative | 2970729 - 2971745 | 35976.9 |
| hypothetical protein | SAMN05444358_10617 | Not Available | Positive | 2971906 - 2972439 | 19065.5 |
| hypothetical protein | SAMN05444358_10618 | Not Available | Positive | 2972615 - 2972785 | 5873.92 |
| protein of unknown function | SAMN05444358_10619 | Not Available | Positive | 2972886 - 2973263 | 13181.6 |
| 23s rrna m(2)a-2503 methyltransferase | SAMN05444358_10620 | Not Available | Positive | 2973341 - 2974528 | 44517.5 |
| cytochrome p460 | SAMN05444358_10621 | Not Available | Positive | 2974757 - 2975380 | 23042.2 |
| putative protease | SAMN05444358_10622 | Not Available | Negative | 2975384 - 2977036 | 62832.5 |
| chaperone modulatory protein cbpm | SAMN05444358_10623 | Not Available | Negative | 2977100 - 2977444 | 13096.8 |
| dnaj domain-containing protein | SAMN05444358_10624 | Not Available | Negative | 2977441 - 2978358 | 33215.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
