Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system, ompr family, response regulator tctd | SAMN05444358_105209 | Not Available | Negative | 2948089 - 2948748 | 24127.7 |
| putative tricarboxylic transport membrane protein | SAMN05444358_105210 | Not Available | Positive | 2948920 - 2949885 | 32944.9 |
| putative tricarboxylic transport membrane protein | SAMN05444358_105211 | Not Available | Positive | 2949956 - 2950387 | 14829.6 |
| putative tricarboxylic transport membrane protein | SAMN05444358_105212 | Not Available | Positive | 2950398 - 2951936 | 53646.0 |
| abc transporter, phosphonate, substrate-binding protein | SAMN05444358_105213 | Not Available | Negative | 2951991 - 2952740 | 27941.1 |
| two component transcriptional regulator, luxr family | SAMN05444358_105214 | Not Available | Negative | 2952737 - 2953354 | 22927.8 |
| hypothetical protein | SAMN05444358_105215 | Not Available | Negative | 2953351 - 2955786 | 90841.8 |
| phosphoserine aminotransferase apoenzyme | SAMN05444358_1062 | Not Available | Positive | 2956032 - 2957186 | 41107.8 |
| d-3-phosphoglycerate dehydrogenase | SAMN05444358_1063 | Not Available | Positive | 2957243 - 2958838 | 56623.5 |
| serine/threonine protein phosphatase 1 | SAMN05444358_1064 | Not Available | Positive | 2958963 - 2959691 | 27416.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
