Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein sco1/2 | SAMN05444358_105189 | Not Available | Positive | 2930139 - 2930756 | 22565.8 |
| response regulator receiver protein | SAMN05444358_105190 | Not Available | Positive | 2930843 - 2931397 | 20202.1 |
| hypothetical protein | SAMN05444358_105191 | Not Available | Positive | 2931477 - 2932331 | 32324.6 |
| glycosyl transferase family 2 | SAMN05444358_105192 | Not Available | Negative | 2932377 - 2933333 | 36809.6 |
| methyltransferase, fkbm family | SAMN05444358_105193 | Not Available | Negative | 2933369 - 2934193 | 30974.0 |
| hypothetical protein | SAMN05444358_105194 | Not Available | Negative | 2934268 - 2934831 | 20553.9 |
| hypothetical protein | SAMN05444358_105195 | Not Available | Positive | 2935069 - 2935383 | 11188.4 |
| adenosylhomocysteinase | SAMN05444358_105196 | Not Available | Positive | 2935487 - 2936875 | 50427.5 |
| predicted dithiol-disulfide oxidoreductase, duf899 family | SAMN05444358_105197 | Not Available | Negative | 2936926 - 2937573 | 24048.6 |
| protein of unknown function | SAMN05444358_105198 | Not Available | Positive | 2937759 - 2938100 | 12497.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
