Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide/nickel transport system substrate-binding protein | SAMN05444358_105169 | Not Available | Positive | 2906291 - 2908330 | 74697.0 |
| peptide/nickel transport system permease protein | SAMN05444358_105170 | Not Available | Positive | 2908392 - 2909396 | 36742.5 |
| peptide/nickel transport system permease protein | SAMN05444358_105171 | Not Available | Positive | 2909401 - 2910531 | 41821.0 |
| peptide/nickel transport system atp-binding protein/peptide/nickel transport system atp-binding protein | SAMN05444358_105172 | Not Available | Positive | 2910528 - 2911526 | 36112.1 |
| peptide/nickel transport system atp-binding protein/oligopeptide transport system atp-binding protein | SAMN05444358_105173 | Not Available | Positive | 2911523 - 2912344 | 30058.2 |
| esterase/lipase superfamily enzyme | SAMN05444358_105174 | Not Available | Negative | 2912399 - 2913496 | 39592.3 |
| atp-dependent hsluv protease atp-binding subunit hslu | SAMN05444358_105175 | Not Available | Negative | 2913594 - 2914901 | 48169.6 |
| predicted arabinose efflux permease, mfs family | SAMN05444358_105176 | Not Available | Positive | 2915093 - 2916334 | 44673.9 |
| hslv component of hsluv peptidase. threonine peptidase. merops family t01b | SAMN05444358_105177 | Not Available | Negative | 2916432 - 2916983 | 19118.9 |
| protein of unknown function | SAMN05444358_105178 | Not Available | Positive | 2917181 - 2917378 | 7278.57 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
