Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-keto-3-deoxy-l-fuconate dehydrogenase | SAMN05444358_105159 | Not Available | Positive | 2895468 - 2896223 | 26484.7 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) | SAMN05444358_105160 | Not Available | Positive | 2896241 - 2897083 | 29935.7 |
| fumarylacetoacetate (faa) hydrolase family protein | SAMN05444358_105161 | Not Available | Positive | 2897102 - 2898256 | 41269.7 |
| nadp-dependent aldehyde dehydrogenase | SAMN05444358_105162 | Not Available | Positive | 2898267 - 2899778 | 52536.4 |
| arylsulfatase a | SAMN05444358_105163 | Not Available | Negative | 2899786 - 2901318 | 57787.7 |
| histidinol-phosphatase, inositol monophosphatase family | SAMN05444358_105164 | Not Available | Positive | 2901692 - 2902495 | 28883.2 |
| phosphate:na+ symporter | SAMN05444358_105165 | Not Available | Positive | 2902500 - 2904200 | 61829.1 |
| hypothetical protein | SAMN05444358_105166 | Not Available | Positive | 2904197 - 2904337 | 5015.0 |
| eama-like transporter family protein | SAMN05444358_105167 | Not Available | Positive | 2904340 - 2905179 | 29645.4 |
| transcriptional regulator, deor family | SAMN05444358_105168 | Not Available | Positive | 2905358 - 2906272 | 32701.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
