Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-nicking endonuclease, smr domain | SAMN05444358_105149 | Not Available | Positive | 2886104 - 2886691 | 21693.7 |
| l-fuconolactonase | SAMN05444358_105150 | Not Available | Negative | 2886776 - 2887606 | 30747.7 |
| d-threo-aldose 1-dehydrogenase | SAMN05444358_105151 | Not Available | Negative | 2887610 - 2888635 | 37563.8 |
| transcriptional regulator, iclr family | SAMN05444358_105152 | Not Available | Negative | 2888632 - 2889453 | 30138.9 |
| carbohydrate abc transporter substrate-binding protein, cut1 family | SAMN05444358_105153 | Not Available | Positive | 2889581 - 2890900 | 47034.4 |
| carbohydrate abc transporter membrane protein 1, cut1 family | SAMN05444358_105154 | Not Available | Positive | 2890978 - 2891868 | 33384.9 |
| carbohydrate abc transporter membrane protein 2, cut1 family | SAMN05444358_105155 | Not Available | Positive | 2891872 - 2892735 | 31854.7 |
| carbohydrate abc transporter atp-binding protein, cut1 family | SAMN05444358_105156 | Not Available | Positive | 2892740 - 2893837 | 39714.1 |
| l-alanine-dl-glutamate epimerase | SAMN05444358_105157 | Not Available | Positive | 2893839 - 2894951 | 40276.6 |
| l-rhamnose mutarotase | SAMN05444358_105158 | Not Available | Positive | 2895135 - 2895464 | 13072.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
