Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heat-inducible transcription repressor hrca | SAMN05444358_105129 | Not Available | Negative | 2868708 - 2869772 | 38803.2 |
| rnase ph | SAMN05444358_105130 | Not Available | Positive | 2869885 - 2870598 | 25128.3 |
| xtp/ditp diphosphohydrolase | SAMN05444358_105131 | Not Available | Positive | 2870595 - 2871209 | 22496.6 |
| oxygen-independent coproporphyrinogen-3 oxidase | SAMN05444358_105132 | Not Available | Positive | 2871202 - 2872353 | 42607.3 |
| hypothetical protein | SAMN05444358_105133 | Not Available | Positive | 2872357 - 2872710 | 12544.8 |
| chromosome segregation dna-binding protein | SAMN05444358_105134 | Not Available | Negative | 2872700 - 2873593 | 32520.2 |
| chromosome partitioning protein | SAMN05444358_105135 | Not Available | Negative | 2873614 - 2874417 | 29201.0 |
| 16s rrna (guanine527-n7)-methyltransferase | SAMN05444358_105136 | Not Available | Negative | 2874410 - 2875033 | 22935.6 |
| trna uridine 5-carboxymethylaminomethyl modification enzyme | SAMN05444358_105137 | Not Available | Negative | 2875030 - 2876898 | 67786.3 |
| trna modification gtpase trme | SAMN05444358_105138 | Not Available | Negative | 2876911 - 2878197 | 45228.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
