Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444358_105119 | Not Available | Negative | 2856674 - 2857441 | 27941.1 |
| argininosuccinate synthase | SAMN05444358_105120 | Not Available | Positive | 2857583 - 2858809 | 45316.0 |
| uncharacterized membrane protein yjgn, duf898 family | SAMN05444358_105121 | Not Available | Positive | 2858940 - 2860007 | 39194.2 |
| peptidase family m48 | SAMN05444358_105122 | Not Available | Positive | 2860012 - 2861055 | 37426.4 |
| scp-2 sterol transfer family protein | SAMN05444358_105123 | Not Available | Positive | 2861120 - 2861404 | 9933.14 |
| peptide-methionine (s)-s-oxide reductase | SAMN05444358_105124 | Not Available | Positive | 2861500 - 2862171 | 24286.8 |
| ribokinase | SAMN05444358_105125 | Not Available | Negative | 2862168 - 2863040 | 30518.3 |
| malate dehydrogenase (oxaloacetate-decarboxylating)(nadp+) | SAMN05444358_105126 | Not Available | Negative | 2863044 - 2865317 | 81828.2 |
| dna mismatch repair protein muts | SAMN05444358_105127 | Not Available | Positive | 2865460 - 2868075 | 94459.1 |
| molecular chaperone grpe | SAMN05444358_105128 | Not Available | Negative | 2868134 - 2868697 | 20847.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
