Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna m(5)u-1939 methyltransferase | SAMN05444358_105109 | Not Available | Negative | 2845272 - 2846501 | 43874.6 |
| atp-binding cassette, subfamily b | SAMN05444358_105110 | Not Available | Negative | 2846541 - 2848373 | 65744.6 |
| atp-binding cassette, subfamily b, multidrug efflux pump | SAMN05444358_105111 | Not Available | Negative | 2848370 - 2850208 | 67616.2 |
| poly(a) polymerase | SAMN05444358_105112 | Not Available | Negative | 2850403 - 2851557 | 41667.7 |
| 8-oxo-dgtp pyrophosphatase mutt, nudix family | SAMN05444358_105113 | Not Available | Negative | 2851554 - 2852153 | 21843.2 |
| molecular chaperone hsp33 | SAMN05444358_105114 | Not Available | Negative | 2852143 - 2853129 | 35587.8 |
| 8-oxo-dgtp diphosphatase | SAMN05444358_105115 | Not Available | Positive | 2853206 - 2853649 | 16655.1 |
| sigma-b regulation protein rsbu (phosphoserine phosphatase) | SAMN05444358_105116 | Not Available | Negative | 2853646 - 2854920 | 46755.1 |
| hpt domain-containing protein | SAMN05444358_105117 | Not Available | Positive | 2855063 - 2855392 | 12244.2 |
| l-threonine ammonia-lyase | SAMN05444358_105118 | Not Available | Negative | 2855389 - 2856615 | 44774.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
