Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative hydroxymethylpyrimidine transport system substrate-binding protein | SAMN05444358_10588 | Not Available | Negative | 2825407 - 2826342 | 33913.6 |
| molybdopterin or thiamine biosynthesis adenylyltransferase | SAMN05444358_10589 | Not Available | Negative | 2826363 - 2827328 | 33845.6 |
| thiamine-phosphate diphosphorylase | SAMN05444358_10590 | Not Available | Negative | 2827325 - 2827921 | 22317.1 |
| thiazole-phosphate synthase | SAMN05444358_10591 | Not Available | Negative | 2827918 - 2828682 | 27244.0 |
| sulfur carrier protein | SAMN05444358_10592 | Not Available | Negative | 2828685 - 2828879 | 6785.1 |
| glycine oxidase | SAMN05444358_10593 | Not Available | Negative | 2828863 - 2829840 | 36114.7 |
| hydroxymethylpyrimidine kinase /phosphomethylpyrimidine kinase | SAMN05444358_10594 | Not Available | Negative | 2829837 - 2830640 | 27258.9 |
| molecular chaperone dnaj | SAMN05444358_10596 | Not Available | Negative | 2831043 - 2832191 | 40559.8 |
| molecular chaperone dnak | SAMN05444358_10597 | Not Available | Negative | 2832266 - 2834173 | 68671.0 |
| alkylated dna repair protein (dna oxidative demethylase) | SAMN05444358_10598 | Not Available | Positive | 2834224 - 2834991 | 28001.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
