Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 8-oxo-dgtp diphosphatase | SAMN05444358_10578 | Not Available | Negative | 2814515 - 2814913 | 14691.8 |
| glutamate n-acetyltransferase | SAMN05444358_10579 | Not Available | Negative | 2814910 - 2816136 | 42271.0 |
| peptidyl-prolyl cis-trans isomerase c | SAMN05444358_10580 | Not Available | Negative | 2816142 - 2816990 | 30617.0 |
| protein translocase subunit seca | SAMN05444358_10581 | Not Available | Positive | 2817167 - 2819884 | 101264.0 |
| hypothetical protein | SAMN05444358_10582 | Not Available | Positive | 2819985 - 2820905 | 32447.2 |
| phosphate abc transporter substrate-binding protein, phot family | SAMN05444358_10583 | Not Available | Positive | 2820932 - 2822488 | 55591.3 |
| dna repair protein radc | SAMN05444358_10584 | Not Available | Negative | 2822492 - 2823247 | 28362.1 |
| putative hydroxymethylpyrimidine transport system permease protein | SAMN05444358_10585 | Not Available | Negative | 2823283 - 2824017 | 26426.4 |
| putative hydroxymethylpyrimidine transport system atp-binding protein | SAMN05444358_10586 | Not Available | Negative | 2824014 - 2824739 | 25738.1 |
| thiaminase (transcriptional activator tena) | SAMN05444358_10587 | Not Available | Negative | 2824736 - 2825410 | 25266.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
