Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05444358_10558 | Not Available | Negative | 2792713 - 2793855 | 40870.6 |
| predicted arabinose efflux permease, mfs family | SAMN05444358_10559 | Not Available | Positive | 2794000 - 2795172 | 40759.8 |
| mannosyltransferase | SAMN05444358_10560 | Not Available | Positive | 2795190 - 2796224 | 38091.3 |
| aspartate semialdehyde dehydrogenase | SAMN05444358_10561 | Not Available | Positive | 2796336 - 2797358 | 37512.9 |
| polyketide cyclase / dehydrase and lipid transport | SAMN05444358_10562 | Not Available | Negative | 2798253 - 2798789 | 19374.2 |
| carbonic anhydrase | SAMN05444358_10563 | Not Available | Negative | 2798891 - 2799541 | 23875.4 |
| hypothetical protein | SAMN05444358_10564 | Not Available | Positive | 2799685 - 2800074 | 14309.1 |
| leucyl aminopeptidase | SAMN05444358_10565 | Not Available | Positive | 2800138 - 2801520 | 47994.5 |
| cell wall-associated hydrolase, nlpc family | SAMN05444358_10566 | Not Available | Positive | 2801517 - 2802254 | 26704.9 |
| protein of unknown function | SAMN05444358_10567 | Not Available | Negative | 2802251 - 2802601 | 13495.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
