Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific dna recombinase | SAMN05444358_10548 | Not Available | Negative | 2783883 - 2784434 | 20517.8 |
| hypothetical protein | SAMN05444358_10549 | Not Available | Negative | 2784578 - 2784745 | 6429.78 |
| hypothetical protein | SAMN05444358_10550 | Not Available | Positive | 2785032 - 2785670 | 23961.9 |
| phage integrase family protein | SAMN05444358_10551 | Not Available | Negative | 2785720 - 2787090 | 50926.6 |
| Trna-arg | Not Available | Not Available | Positive | 2787188 - 2787264 | Not Available |
| transcriptional regulator, laci family | SAMN05444358_10553 | Not Available | Positive | 2787445 - 2788404 | 34757.2 |
| hypothetical protein | SAMN05444358_10554 | Not Available | Positive | 2788411 - 2789622 | 46889.9 |
| transcriptional regulator, xre family with shikimate kinase activity | SAMN05444358_10555 | Not Available | Negative | 2789629 - 2790528 | 32939.4 |
| transcriptional regulator, marr family | SAMN05444358_10556 | Not Available | Negative | 2790692 - 2791057 | 13823.0 |
| aromatic-l-amino-acid decarboxylase | SAMN05444358_10557 | Not Available | Positive | 2791307 - 2792716 | 52949.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
