Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| homogentisate 1,2-dioxygenase | SAMN05444358_10528 | Not Available | Positive | 2763158 - 2764522 | 51144.6 |
| fumarylacetoacetate hydrolase | SAMN05444358_10529 | Not Available | Positive | 2764722 - 2765981 | 45690.9 |
| glyoxylase, beta-lactamase superfamily ii | SAMN05444358_10530 | Not Available | Positive | 2765994 - 2766944 | 34892.9 |
| 3-(3-hydroxy-phenyl)propionate hydroxylase | SAMN05444358_10531 | Not Available | Positive | 2767083 - 2768702 | 60395.6 |
| protein of unknown function | SAMN05444358_10532 | Not Available | Positive | 2768708 - 2768905 | 7259.39 |
| catechol 2,3-dioxygenase | SAMN05444358_10533 | Not Available | Positive | 2768910 - 2769452 | 20891.0 |
| methylenetetrahydrofolate reductase (nadph) | SAMN05444358_10534 | Not Available | Negative | 2769626 - 2770618 | 35716.9 |
| methylene-tetrahydrofolate reductase c terminal | SAMN05444358_10535 | Not Available | Negative | 2770615 - 2771196 | 21675.1 |
| transposase | SAMN05444358_10536 | Not Available | Negative | 2772399 - 2772827 | 15617.7 |
| transposase | SAMN05444358_10537 | Not Available | Negative | 2772971 - 2773357 | 14084.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
