Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna recombination protein rmuc | SAMN05444358_104260 | Not Available | Positive | 2719415 - 2720644 | 44901.9 |
| anti-ecfsigma factor, chrr | SAMN05444358_104261 | Not Available | Negative | 2720655 - 2721305 | 23164.7 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444358_104262 | Not Available | Negative | 2721316 - 2721972 | 25053.0 |
| hypothetical protein | SAMN05444358_104263 | Not Available | Positive | 2722122 - 2722892 | 29377.4 |
| protein of unknown function | SAMN05444358_104264 | Not Available | Positive | 2722980 - 2723297 | 11524.7 |
| hypothetical protein | SAMN05444358_104265 | Not Available | Positive | 2723435 - 2724025 | 21865.4 |
| hypothetical protein | SAMN05444358_104266 | Not Available | Positive | 2724041 - 2724517 | 17868.9 |
| saccharopine dehydrogenase (nadp+, l-glutamate forming) | SAMN05444358_104267 | Not Available | Negative | 2724556 - 2725698 | 42026.8 |
| saccharopine dehydrogenase (nad+, l-lysine-forming) | SAMN05444358_104268 | Not Available | Negative | 2725702 - 2726757 | 37734.8 |
| glutathione s-transferase | SAMN05444358_104269 | Not Available | Negative | 2726772 - 2727386 | 22185.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
