Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc protease | SAMN05444358_104250 | Not Available | Positive | 2706142 - 2707482 | 49491.1 |
| zinc protease | SAMN05444358_104251 | Not Available | Positive | 2707479 - 2708789 | 47334.7 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05444358_104252 | Not Available | Negative | 2708952 - 2709767 | 28002.5 |
| aldehyde dehydrogenase (nad+) | SAMN05444358_104253 | Not Available | Negative | 2709792 - 2712125 | 82971.1 |
| deoxyribose-phosphate aldolase | SAMN05444358_104254 | Not Available | Negative | 2712137 - 2713135 | 36057.4 |
| manganese/zinc/iron transport system substrate-binding protein | SAMN05444358_104255 | Not Available | Positive | 2713333 - 2714286 | 33828.2 |
| manganese/zinc/iron transport system atp-binding protein | SAMN05444358_104256 | Not Available | Positive | 2714290 - 2715093 | 28676.8 |
| manganese/zinc/iron transport system permease protein | SAMN05444358_104257 | Not Available | Positive | 2715096 - 2716301 | 42442.3 |
| manganese/zinc/iron transport system permease protein | SAMN05444358_104258 | Not Available | Positive | 2716298 - 2717227 | 31964.8 |
| dna mismatch repair protein mutl | SAMN05444358_104259 | Not Available | Positive | 2717512 - 2719362 | 66401.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
