Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydrodipicolinate reductase | SAMN05444358_104240 | Not Available | Positive | 2696483 - 2697292 | 28209.8 |
| phosphonate degradation operons associated hdig domain protein | SAMN05444358_104241 | Not Available | Negative | 2697364 - 2697954 | 22128.9 |
| gamma-butyrobetaine dioxygenase | SAMN05444358_104242 | Not Available | Negative | 2697951 - 2699087 | 41407.4 |
| transcriptional regulator, lysr family | SAMN05444358_104243 | Not Available | Positive | 2699186 - 2700043 | 31579.3 |
| protein of unknown function | SAMN05444358_104244 | Not Available | Negative | 2700044 - 2700226 | 6656.74 |
| 16s rrna (cytosine967-c5)-methyltransferase | SAMN05444358_104245 | Not Available | Positive | 2700318 - 2701577 | 45331.5 |
| uncharacterized conserved protein, heparinase superfamily | SAMN05444358_104246 | Not Available | Positive | 2701666 - 2703405 | 63581.3 |
| phosphoribosylaminoimidazolecarboxamide formyltransferase / imp cyclohydrolase | SAMN05444358_104247 | Not Available | Positive | 2703362 - 2705020 | 58324.3 |
| signal peptidase ii | SAMN05444358_104248 | Not Available | Positive | 2705020 - 2705490 | 16956.1 |
| beta-barrel assembly machine subunit bamf | SAMN05444358_104249 | Not Available | Positive | 2705541 - 2706056 | 18323.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
