Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arylsulfatase | SAMN05444358_104230 | Not Available | Positive | 2685900 - 2687468 | 57301.1 |
| betaine/carnitine transporter, bcct family | SAMN05444358_104231 | Not Available | Positive | 2687700 - 2689301 | 57603.2 |
| hypothetical protein | SAMN05444358_104232 | Not Available | Negative | 2689412 - 2689621 | 7861.56 |
| vplpa-cterm protein sorting domain-containing protein | SAMN05444358_104233 | Not Available | Positive | 2690440 - 2692086 | 55215.0 |
| ssu ribosomal protein s15p | SAMN05444358_104234 | Not Available | Negative | 2692237 - 2692506 | 10155.5 |
| hemolysin-type calcium-binding repeat-containing protein | SAMN05444358_104235 | Not Available | Negative | 2692651 - 2693673 | 35279.0 |
| hypothetical protein | SAMN05444358_104236 | Not Available | Negative | 2693770 - 2694273 | 18715.0 |
| trna pseudouridine synthase b | SAMN05444358_104237 | Not Available | Negative | 2694295 - 2695200 | 32517.6 |
| uncharacterized protein yige, duf2233 family | SAMN05444358_104238 | Not Available | Negative | 2695255 - 2695998 | 26926.7 |
| ribosome-binding factor a | SAMN05444358_104239 | Not Available | Negative | 2695995 - 2696390 | 15025.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
