Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyltransferase (gnat) family protein | SAMN05444358_104220 | Not Available | Negative | 2675031 - 2675603 | 21690.5 |
| sugar or nucleoside kinase, ribokinase family | SAMN05444358_104221 | Not Available | Negative | 2675724 - 2676713 | 35116.8 |
| dna-(apurinic or apyrimidinic site) lyase /endonuclease iii | SAMN05444358_104222 | Not Available | Negative | 2676710 - 2677402 | 25723.1 |
| arac family transcriptional regulator, regulatory protein of adaptative response / methylated-dna-[protein]-cysteine methyltransferase | SAMN05444358_104223 | Not Available | Positive | 2677473 - 2678324 | 31131.5 |
| hypothetical protein | SAMN05444358_104224 | Not Available | Positive | 2678502 - 2678936 | 16215.3 |
| aldehyde dehydrogenase (nad+) | SAMN05444358_104225 | Not Available | Negative | 2678993 - 2680432 | 51056.7 |
| 1-cys peroxiredoxin | SAMN05444358_104226 | Not Available | Positive | 2680652 - 2681302 | 23686.0 |
| hint domain-containing protein | SAMN05444358_104227 | Not Available | Negative | 2681384 - 2682379 | 36392.0 |
| polyribonucleotide nucleotidyltransferase | SAMN05444358_104228 | Not Available | Negative | 2682546 - 2684696 | 77575.7 |
| transcriptional regulator, lysr family | SAMN05444358_104229 | Not Available | Negative | 2684873 - 2685775 | 33117.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
