Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyltransferase (gnat) family protein | SAMN05444358_104210 | Not Available | Positive | 2666618 - 2667328 | 25618.8 |
| uncharacterized peroxidase-related enzyme | SAMN05444358_104211 | Not Available | Positive | 2667339 - 2667911 | 21380.9 |
| ompa-ompf porin, oop family | SAMN05444358_104212 | Not Available | Positive | 2667908 - 2668807 | 32202.3 |
| uncharacterized membrane protein | SAMN05444358_104213 | Not Available | Positive | 2668891 - 2669709 | 30275.4 |
| transcriptional regulator, lysr family | SAMN05444358_104214 | Not Available | Negative | 2669815 - 2670720 | 33017.3 |
| protein of unknown function | SAMN05444358_104215 | Not Available | Positive | 2670949 - 2671389 | 15045.7 |
| hypothetical protein | SAMN05444358_104216 | Not Available | Negative | 2671404 - 2671793 | 14361.0 |
| hypothetical protein | SAMN05444358_104217 | Not Available | Negative | 2671790 - 2672041 | 9706.6 |
| 2,4-dienoyl-coa reductase | SAMN05444358_104218 | Not Available | Negative | 2672138 - 2674165 | 72802.3 |
| putative (di)nucleoside polyphosphate hydrolase | SAMN05444358_104219 | Not Available | Positive | 2674303 - 2674794 | 19106.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
