Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine zipper 2tm domain-containing protein | SAMN05444358_104200 | Not Available | Negative | 2659673 - 2659918 | 7759.43 |
| cytochrome c peroxidase | SAMN05444358_104201 | Not Available | Negative | 2660021 - 2660506 | 16984.5 |
| 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit | SAMN05444358_104202 | Not Available | Positive | 2660606 - 2661817 | 43134.5 |
| 16s rrna (guanine966-n2)-methyltransferase | SAMN05444358_104203 | Not Available | Positive | 2661814 - 2662368 | 19643.4 |
| haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed | SAMN05444358_104204 | Not Available | Positive | 2662369 - 2663004 | 22632.1 |
| hypothetical protein | SAMN05444358_104205 | Not Available | Positive | 2663030 - 2663209 | 6652.9 |
| methionine aminopeptidase, type i | SAMN05444358_104206 | Not Available | Negative | 2663197 - 2664009 | 29211.9 |
| hypothetical protein | SAMN05444358_104207 | Not Available | Negative | 2664179 - 2665018 | 30943.9 |
| sugar fermentation stimulation protein a | SAMN05444358_104208 | Not Available | Negative | 2665146 - 2665847 | 26066.2 |
| molybdenum cofactor synthesis domain-containing protein | SAMN05444358_104209 | Not Available | Positive | 2665899 - 2666621 | 25253.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
